(*): W=Win, N=Nomination
| Year | * | Category | Works | Shared |
|---|---|---|---|---|
| 2016 | N | Best TV Actor | The X-Files (2016) (TV) | - |
| 1999 | N | Best Actor | The X Files (1998) (TV) | - |
| 1999 | N | Best Genre TV Actor | The X Files (1993) (TV) | - |
| 1997 | N | Best Genre TV Actor | The X Files (1993) (TV) | - |
| Year | * | Category | Works | Shared |
|---|---|---|---|---|
| 1997 | W | Best Foreign TV Personality - Male (Basta utlandska man) | - | - |
| Year | * | Category | Works | Shared |
|---|---|---|---|---|
| 1999 | W | Funniest Male Guest Appearance in a TV Series | The Larry Sanders Show (1992) (TV) | - |
| Year | * | Category | Works | Shared |
|---|---|---|---|---|
| 2008 | N | Best International | Californication (2007) (TV) | Tom Kapinos, Scott Winant |
| Year | * | Category | Works | Shared |
|---|---|---|---|---|
| 2003 | N | Outstanding Guest Actor in a Comedy Series (For playing "Johnny Volcano") | Life with Bonnie (2002) (TV) | - |
| 1998 | N | Outstanding Lead Actor in a Drama Series | The X Files (1993) (TV) | - |
| 1997 | N | Outstanding Guest Actor in a Comedy Series (For playing himself. For episode "Everybody Loves Larry") | The Larry Sanders Show (1992) (TV) | - |
| 1997 | N | Outstanding Lead Actor in a Drama Series | The X Files (1993) (TV) | - |
| Year | * | Category | Works | Shared |
|---|---|---|---|---|
| 2010 | N | Best Performance by an Actor in a Television Series - Musical or Comedy | Californication (2007) (TV) | - |
| 2009 | N | Best Performance by an Actor in a Television Series - Musical or Comedy | Californication (2007) (TV) | - |
| 2008 | W | Best Performance by an Actor in a Television Series - Musical or Comedy | Californication (2007) (TV) | - |
| 1999 | N | Best Performance by an Actor in a TV-Series - Drama | The X Files (1993) (TV) | - |
| 1998 | N | Best Performance by an Actor in a TV-Series - Drama | The X Files (1993) (TV) | - |
| 1997 | W | Best Performance by an Actor in a TV-Series - Drama | The X Files (1993) (TV) | - |
| 1996 | N | Best Performance by an Actor in a TV-Series - Drama | The X Files (1993) (TV) | - |
| Year | * | Category | Works | Shared |
|---|---|---|---|---|
| 1996 | W | Most Popular Actor | The X Files (1993) (TV) | - |
| Year | * | Category | Works | Shared |
|---|---|---|---|---|
| 2000 | N | Favorite Television Friends | The X Files (1993) (TV) | Gillian Anderson |
| Year | * | Category | Works | Shared |
|---|---|---|---|---|
| 2010 | W | Comedy | Californication (2007) (TV) | Tom Kapinos, Gina Fattore, Jay Dyer |
| Year | * | Category | Works | Shared |
|---|---|---|---|---|
| 2008 | N | Actor in a Series, Comedy or Musical | Californication (2007) (TV) | - |
| 1998 | N | Best Performance by an Actor in a Television Series - Drama | The X Files (1993) (TV) | - |
| 1997 | W | Best Performance by an Actor in a Television Series - Drama | The X Files (1993) (TV) | - |
| Year | * | Category | Works | Shared |
|---|---|---|---|---|
| 1995 | W | Best Actor in a Genre TV Series | The X Files (1993) (TV) | Bruce Boxleitner for "Babylon 5" (1994) |
| Year | * | Category | Works | Shared |
|---|---|---|---|---|
| 2009 | N | Outstanding Performance by a Male Actor in a Comedy Series | Californication (2007) (TV) | - |
| 2000 | N | Outstanding Performance by a Male Actor in a Drama Series | The X Files (1993) (TV) | - |
| 1999 | N | Outstanding Performance by a Male Actor in a Drama Series | The X Files (1993) (TV) | - |
| 1999 | N | Outstanding Performance by an Ensemble in a Drama Series | The X Files (1993) (TV) | Gillian Anderson, William B. Davis, Chris Owens |
| 1998 | N | Outstanding Performance by a Male Actor in a Drama Series | The X Files (1993) (TV) | - |
| 1998 | N | Outstanding Performance by an Ensemble in a Drama Series | The X Files (1993) (TV) | Gillian Anderson, William B. Davis, Mitch Pileggi |
| 1997 | N | Outstanding Performance by a Male Actor in a Drama Series | The X Files (1993) (TV) | - |
| 1997 | N | Outstanding Performance by an Ensemble in a Drama Series | The X Files (1993) (TV) | Gillian Anderson, William B. Davis, Mitch Pileggi |
| 1996 | N | Outstanding Performance by a Male Actor in a Drama Series | The X Files (1993) (TV) | - |
| Year | * | Category | Works | Shared |
|---|---|---|---|---|
| 2000 | N | Favorite Actor in a Drama | The X Files (1993) (TV) | - |
| 1999 | W | Favorite Actor in a Drama | The X Files (1993) (TV) | - |
| Year | * | Category | Works | Shared |
|---|---|---|---|---|
| 1995 | N | Best Actor in a Quality Drama Series | The X Files (1993) (TV) | - |
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